- Evo_source
- “Evo_source” column indicates that whether this record is a known precursor miRNA (pre-mir) from miRBase 13.0, an orthologous pre-mir highly similar to pre-mirs from other species or a paralogous pre-mir highly similar to pre-mirs from own species.
- Species_No
- In “Species_No” column, the value “a/b” indicates that a out of 86 (22+34+30) species are known to encode this pre-mir class and b out of 86 species are known or predicted to encode this pre-miR class.
- Distribution
- In “Distribution” column, the value “c/d” indicates that c pre-mirs in this own species belong to this pre-mir class and that d pre-mirs in all 86 (22+34+30) species belong to this pre-mir class.
Index | ID | Class | Mature miRNA (MatMiR) |
Match/ MatMiR Length |
Chrom | Strand | MatMiR Position |
PreMir Position |
Confidence | Evo_ Source |
Species_ No |
Distribution |
---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | ssc-mir-105-2 | mir-105 | ssc-miR-105-2 | 20/20 | N/A | N/A | 13-32 | N/A | - | miRBase_13_0 | 13/21 | 2/30 |
2 | ssc-mir-29b | mir-29 | ssc-miR-29b | 20/20 | chr18 | + | 51-70 | N/A | - | miRBase_13_0 | 28/46 | 2/165 |
3 | ssc-mir-28 | mir-28 | ssc-miR-28 | 22/22 | N/A | N/A | 14-35 | N/A | - | miRBase_13_0 | 15/19 | 1/19 |
4 | ssc-mir-26a | mir-26 | ssc-miR-26a | 22/22 | N/A | N/A | 14-35 | N/A | - | miRBase_13_0 | 19/38 | 1/88 |
5 | ssc-mir-24 | mir-24 | ssc-miR-24 | 22/22 | N/A | N/A | 50-71 | N/A | - | miRBase_13_0 | 19/35 | 1/74 |
6 | ssc-mir-23a | mir-23 | ssc-miR-23a | 21/21 | N/A | N/A | 42-62 | N/A | - | miRBase_13_0 | 22/39 | 1/78 |
7 | ssc-mir-224 | mir-224 | ssc-miR-224 | 23/23 | N/A | N/A | 8-30 | N/A | - | miRBase_13_0 | 12/21 | 1/21 |
8 | ssc-mir-217 | mir-217 | ssc-miR-217 | 24/24 | chr3 | + | 32-55 | N/A | - | miRBase_13_0 | 20/37 | 1/47 |
9 | ssc-mir-216 | mir-216 | ssc-miR-216 | 21/21 | chr3 | + | 19-39 | N/A | - | miRBase_13_0 | 24/39 | 1/67 |
10 | ssc-mir-20 | mir-20 | ssc-miR-20 | 22/22 | chr11 | + | 8-29 | N/A | - | miRBase_13_0 | 24/42 | 1/98 |
11 | ssc-mir-19a | mir-19 | ssc-miR-19a | 23/23 | chr11 | + | 49-71 | N/A | - | miRBase_13_0 | 25/43 | 1/128 |
12 | ssc-mir-184 | mir-184 | ssc-miR-184 | 22/22 | chr7 | + | 52-73 | N/A | - | miRBase_13_0 | 40/54 | 1/73 |
13 | ssc-mir-181b | mir-181 | ssc-miR-181b | 24/24 | chr1 | + | 13-36 | N/A | - | miRBase_13_0 | 22/39 | 3/168 |
14 | ssc-mir-15b | mir-15 | ssc-miR-15b | 22/22 | chr13 | + | 20-41 | N/A | - | miRBase_13_0 | 23/37 | 2/69 |
15 | ssc-mir-148a | mir-148 | ssc-miR-148a | 22/22 | chr18 | - | 44-65 | N/A | - | miRBase_13_0 | 14/26 | 1/45 |
16 | ssc-mir-145 | mir-145 | ssc-miR-145 | 24/24 | chr2 | + | 16-39 | N/A | - | miRBase_13_0 | 15/29 | 1/32 |
17 | ssc-mir-135-2 | mir-135 | ssc-miR-135 | 23/23 | N/A | N/A | 23-45 | N/A | - | miRBase_13_0 | 21/39 | 2/118 |
18 | ssc-mir-135-1 | mir-135 | ssc-miR-135 | 23/23 | chr13 | - | 17-39 | N/A | - | miRBase_13_0 | 21/39 | 2/118 |
19 | ssc-mir-301 | mir-301 | ssc-miR-301 | 23/23 | N/A | N/A | 48-70 | N/A | - | miRBase_13_0 | 14/32 | 1/60 |
20 | ssc-mir-323 | mir-323 | ssc-miR-323 | 22/22 | N/A | N/A | 50-71 | N/A | - | miRBase_13_0 | 8/18 | 1/22 |
21 | ssc-mir-326 | mir-326 | ssc-miR-326 | 20/20 | chr9 | - | 56-75 | N/A | - | miRBase_13_0 | 7/12 | 1/12 |
22 | ssc-mir-205 | mir-205 | ssc-miR-205 | 22/22 | chr9 | - | 7-28 | N/A | - | miRBase_13_0 | 19/38 | 1/48 |
23 | ssc-mir-21 | mir-21 | ssc-miR-21 | 22/22 | chr12 | + | 18-39 | N/A | - | miRBase_13_0 | 20/35 | 1/41 |
24 | ssc-mir-214 | mir-214 | ssc-miR-214 | 21/21 | chr9 | - | 71-91 | N/A | - | miRBase_13_0 | 21/39 | 1/41 |
25 | ssc-let-7c | let-7 | ssc-let-7c | 22/22 | chr13 | + | 16-37 | N/A | - | miRBase_13_0 | 44/65 | 3/337 |
26 | ssc-let-7i | let-7 | ssc-let-7i | 19/19 | chr5 | + | 6-24 | N/A | - | miRBase_13_0 | 44/65 | 3/337 |
27 | ssc-let-7f | let-7 | ssc-let-7f | 22/22 | chrX | - | 8-29 | N/A | - | miRBase_13_0 | 44/65 | 3/337 |
28 | ssc-mir-204 | mir-204 | ssc-miR-204 | 22/22 | chr1 | - | 32-53 | N/A | - | miRBase_13_0 | 20/29 | 1/38 |
29 | ssc-mir-27a | mir-27 | ssc-miR-27a | 21/21 | N/A | N/A | 54-74 | N/A | - | miRBase_13_0 | 22/38 | 1/81 |
30 | ssc-mir-325 | mir-325 | ssc-miR-325 | 23/23 | chrX | + | 12-34 | N/A | - | miRBase_13_0 | 6/10 | 1/12 |
31 | ssc-mir-32 | mir-32 | ssc-miR-32 | 21/21 | N/A | N/A | 6-26 | N/A | - | miRBase_13_0 | 16/30 | 1/31 |
32 | ssc-mir-99b | mir-99 | ssc-miR-99b | 22/22 | chr6 | + | 7-28 | N/A | - | miRBase_13_0 | 17/32 | 1/46 |
33 | ssc-mir-183 | mir-183 | ssc-miR-183 | 23/23 | chr18 | - | 6-28 | N/A | - | miRBase_13_0 | 25/42 | 1/51 |
34 | ssc-mir-181c | mir-181 | ssc-miR-181c | 22/22 | N/A | N/A | 15-36 | N/A | - | miRBase_13_0 | 22/39 | 3/168 |
35 | ssc-mir-140 | mir-140 | ssc-miR-140* | 23/23 | N/A | N/A | 45-67 | N/A | - | miRBase_13_0 | 15/31 | 1/51 |
36 | ssc-mir-140 | mir-140 | ssc-miR-140 | 21/21 | N/A | N/A | 7-27 | N/A | - | miRBase_13_0 | 15/31 | 1/51 |
37 | ssc-mir-95 | mir-95 | ssc-miR-95 | 22/22 | chr8 | - | 49-70 | N/A | - | miRBase_13_0 | 11/13 | 1/17 |
38 | ssc-mir-7 | mir-7 | ssc-miR-7 | 21/21 | N/A | N/A | 23-43 | N/A | - | miRBase_13_0 | 46/63 | 1/143 |
39 | ssc-mir-125b | mir-125 | ssc-miR-125b | 22/22 | N/A | N/A | 17-38 | N/A | - | miRBase_13_0 | 45/62 | 1/195 |
40 | ssc-mir-122 | mir-122 | ssc-miR-122 | 23/23 | chr1 | - | 15-37 | N/A | - | miRBase_13_0 | 15/27 | 1/31 |
41 | ssc-mir-130a | mir-130 | ssc-miR-130a | 22/22 | chr2 | - | 50-71 | N/A | - | miRBase_13_0 | 18/35 | 1/71 |
42 | ssc-mir-34a | mir-34 | ssc-miR-34a | 22/22 | N/A | N/A | 7-28 | N/A | - | miRBase_13_0 | 45/67 | 1/144 |
43 | ssc-mir-185 | mir-185 | ssc-miR-185 | 22/22 | chr14 | + | 11-32 | N/A | - | miRBase_13_0 | 8/22 | 1/25 |
44 | ssc-mir-199b | mir-199 | ssc-miR-199b* | 22/22 | chr1 | - | 46-67 | N/A | - | miRBase_13_0 | 22/39 | 1/87 |
45 | ssc-mir-210 | mir-210 | ssc-miR-210 | 22/22 | N/A | N/A | 48-69 | N/A | - | miRBase_13_0 | 33/43 | 1/62 |
46 | ssc-mir-221 | mir-221 | ssc-miR-221 | 22/22 | chrX | - | 44-65 | N/A | - | miRBase_13_0 | 18/27 | 1/31 |
47 | ssc-mir-105-1 | mir-105 | ssc-miR-105-1 | 20/20 | N/A | N/A | 13-32 | N/A | - | miRBase_13_0 | 13/21 | 2/30 |
48 | ssc-mir-101a-1 | mir-101 | ssc-miR-101a | 21/21 | chr1 | - | 55-75 | N/A | - | miRBase_13_0 | 23/40 | 2/76 |
49 | ssc-mir-101a-2 | mir-101 | ssc-miR-101a | 21/21 | chr6 | + | 50-70 | N/A | - | miRBase_13_0 | 23/40 | 2/76 |
50 | ssc-mir-124a-1 | mir-124 | ssc-miR-124a | 21/21 | chr4 | - | 59-79 | N/A | - | miRBase_13_0 | 47/65 | 2/135 |
51 | ssc-mir-133a | mir-133 | ssc-miR-133a | 21/21 | chr17 | - | 61-81 | N/A | - | miRBase_13_0 | 47/64 | 1/138 |
52 | ssc-mir-1a | mir-1 | ssc-miR-1a | 21/21 | chr17 | + | 64-84 | N/A | - | miRBase_13_0 | 41/61 | 1/166 |
53 | ssc-mir-450 | mir-450 | ssc-miR-450 | 22/22 | chrX | - | 28-49 | N/A | - | miRBase_13_0 | 8/17 | 1/34 |
54 | ssc-mir-503 | mir-503 | ssc-miR-503 | 23/23 | N/A | N/A | 22-44 | N/A | - | miRBase_13_0 | 7/12 | 1/12 |
55 | ssc-mir-146b | mir-146 | ssc-miR-146b | 21/21 | chr14 | + | 21-41 | N/A | - | miRBase_13_0 | 12/31 | 1/55 |
56 | ssc-mir-181a | mir-181 | ssc-miR-181a | 22/22 | chr10 | - | 23-44 | N/A | - | miRBase_13_0 | 22/39 | 3/168 |
57 | ssc-mir-215 | mir-215 | ssc-miR-215 | 21/21 | chr10 | - | 20-40 | N/A | - | miRBase_13_0 | 14/30 | 1/35 |
58 | ssc-mir-30b | mir-30 | ssc-miR-30b | 22/22 | chr4 | + | 11-32 | N/A | - | miRBase_13_0 | 21/38 | 3/186 |
59 | ssc-mir-16-2 | mir-16 | ssc-miR-16 | 22/22 | chr13 | + | 8-29 | N/A | - | miRBase_13_0 | 23/38 | 2/61 |
60 | ssc-mir-17 | mir-17 | ssc-miR-17 | 23/23 | chr11 | + | 10-32 | N/A | - | miRBase_13_0 | 23/41 | 1/78 |
61 | ssc-mir-106a | mir-106 | ssc-miR-106a | 24/24 | chrX | - | 13-36 | N/A | - | miRBase_13_0 | 18/39 | 1/100 |
62 | ssc-mir-186 | mir-186 | ssc-miR-186 | 23/23 | chr6 | + | 15-37 | N/A | - | miRBase_13_0 | 12/24 | 1/29 |
63 | ssc-mir-18 | mir-18 | ssc-miR-18 | 22/22 | chr11 | + | 14-35 | N/A | - | miRBase_13_0 | 24/37 | 1/57 |
64 | ssc-mir-153 | mir-153 | ssc-miR-153 | 20/20 | N/A | N/A | 53-72 | N/A | - | miRBase_13_0 | 23/36 | 1/55 |
65 | ssc-mir-139 | mir-139 | ssc-miR-139 | 18/18 | N/A | N/A | 7-24 | N/A | - | miRBase_13_0 | 13/28 | 1/30 |
66 | ssc-mir-136 | mir-136 | ssc-miR-136 | 23/23 | N/A | N/A | 15-37 | N/A | - | miRBase_13_0 | 12/21 | 1/22 |
67 | ssc-mir-128 | mir-128 | ssc-miR-128 | 22/22 | chr15 | + | 50-71 | N/A | - | miRBase_13_0 | 19/36 | 1/66 |
68 | ssc-mir-124a-2 | mir-124 | ssc-miR-124a | 21/21 | chr14 | - | 53-73 | N/A | - | miRBase_13_0 | 47/65 | 2/135 |
69 | ssc-mir-107 | mir-107 | ssc-miR-107 | 23/23 | chr14 | - | 52-74 | N/A | - | miRBase_13_0 | 20/37 | 1/68 |
70 | ssc-mir-103 | mir-103 | ssc-miR-103 | 23/23 | chr16 | + | 50-72 | N/A | - | miRBase_13_0 | 21/38 | 1/118 |
71 | ssc-mir-196 | mir-196 | ssc-miR-196 | 21/21 | N/A | N/A | 22-42 | N/A | - | miRBase_13_0 | 20/38 | 1/91 |
72 | ssc-mir-9-2 | mir-9 | ssc-miR-9-2 | 23/23 | chr2 | - | 16-38 | N/A | - | miRBase_13_0 | 41/59 | 2/206 |
73 | ssc-mir-9-1 | mir-9 | ssc-miR-9-1 | 23/23 | chr4 | - | 16-38 | N/A | - | miRBase_13_0 | 41/59 | 2/206 |
74 | ssc-mir-30c | mir-30 | ssc-miR-30c | 23/23 | chr1 | + | 10-32 | N/A | - | miRBase_13_0 | 21/38 | 3/186 |
75 | ssc-mir-29c | mir-29 | ssc-miR-29c | 22/22 | N/A | N/A | 54-75 | N/A | - | miRBase_13_0 | 28/46 | 2/165 |
76 | ssc-mir-15a | mir-15 | ssc-miR-15a | 21/21 | chr11 | + | 12-32 | N/A | - | miRBase_13_0 | 23/37 | 2/69 |
77 | ssc-mir-16-1 | mir-16 | ssc-miR-16 | 22/22 | chr11 | + | 9-30 | N/A | - | miRBase_13_0 | 23/38 | 2/61 |
78 | ssc-mir-30a | mir-30 | ssc-miR-30a | 22/22 | chr1 | - | 21-42 | N/A | - | miRBase_13_0 | 21/38 | 3/186 |
Total | 78 record(s). |